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molecular phylogeny of arbuscular mycorrhizal fungi (AMF)

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Phylogenetic reference data for systematics and phylotaxonomy of arbuscular mycorrhizal fungi from phylum to species-level. Krüger M, Krüger C, Walker C, Stockinger H, Schüßler A (2012) New Phytologist 193: 970-984 [free full text PDF (1.4 MB) with supplementary, the definitive version is available at http://www.blackwell-synergy.com/loi/nph]
Alignments in FASTA format, the first sequence is the mask used for the analyses (X = sites used):

'Glomus intraradices DAOM197198', a model fungus in arbuscular mycorrhiza research, is not Glomus intraradices. Stockinger H, Walker C, Schüßler A (2009) New Phytologist: Published Online: Jun 3 2009; DOI: 10.1111/j.1469-8137.2009.02874.x  [Full text PDF (1.7 MB), the definitive version is available at http://www.blackwell-synergy.com/loi/nph]
Alignments in FASTA format, the first sequence is the mask used for the analyses (0 = not used, X = used sites):

Diversispora celata sp. nov: molecular ecology and phylotaxonomy of an inconspicuous arbuscular mycorrhizal fungus. Gamper HA, Walker C, Schüßler A (2009) New Phytologist 182: 495-506 [Full text PDF (3.4 MB), the definitive version is available at http://www.blackwell-synergy.com/loi/nph]
Alignments in FASTA format, the first sequence is the mask used for the analyses (- = not used, * = used sites):

Glomeromycota rRNA genes - the diversity of myths? Schüßler A, Schwarzott D, Walker C (2003) Mycorrhiza 13: 233-236 Abstract
Supplementary material and some information on contaminants & problematic AMF rDNA sequences were shown on the 'contaminant problems' pages, but we have inactivated those, as most of the problems are now widely known. The problems will all be solved by a curated database setup in 2011, in international collaboration, which will be open to the scientific community.

A new fungal phylum, the Glomeromycota : phylogeny and evolution. Schüßler A, Schwarzott D, Walker C (2001). Mycological Research 105: 1413-1421 Abstract
Alignment of 56 AMF sequences, Mortierella and Endogone as outgroup, with longest mask for sites used in the analyses shown (first sequence: - = not used, T = used sites; shorter sets were also analysed):

Glomus, the largest genus of the arbuscular mycorrhizal fungi (Glomales), is non-monophyletic. Schwarzott D, Walker C, Schüßler A (2001). Molecular Phylogenetics and Evolution 21: 190-197 Abstract
Alignment of 56 AMF sequences, Mortierella and Endogone as outgroup, with longest mask for sites used in the analyses shown  (first sequence: - = not used, T = used sites; shorter sets were also analysed):